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Lucila Ohno-MachadoDirector, Boston Informatics Training Program
Education
Current Research Projects
Collaborations
TeachingSelected PublicationsNygaard V, Liu F, Holden M, Kuo WP, Trimarchi J, Ohno-Machado L, Cepko CL, Frigessi A, Glad IK, van de Wiel MA, Hovig E, Lyng H. Validation of oligoarrays for quantitative exploration of the transcriptome. BMC Genomics. 2008 May 30;9(1):258. (full text) (pdf)
Hasina R, Whipple ME, Martin LE, Kuo WP, Ohno-Machado L, Lingen MW. Angiogenic heterogeneity in head and neck squamous cell carcinoma: biological and therapeutic implications. Lab Invest. 2008 Apr;88(4):342-53.
Matheny ME, Ohno-Machado L, Resnic FS. Risk-Adjusted SPRT Control Chart Methods for Monitoring Operator and Institutional Mortality Rates in Interventional Cardiology. American Heart Journal. 2008 Jan;155(1):114-20.
Curtis DW, Pino EJ, Bailey JM, Shih EI, Waterman J, Vinterbo SA, Stair TO, Gutagg JV, Greenes RA, Ohno-Machado L. SMART: An Integrated, Wireless System for Monitoring Unattended Patients. J Am Med Inform Assoc. 2007;15(1):44-53.
Stransky B, Barrera J, Ohno-Machado L, De Souza SJ. Modeling cancer: integration of "omics" information in dynamic systems. J Bioinform Comput Biol. 2007 Aug;5(4):977-86.
Matheny ME, Resnic FS, Ohno-Machado L. Effects of SVM parameter optimization on discrimination and calibration for post-procedural PCI mortality. J Biomed Inform. 2007 May 18.
Liu F, Jenssen TK, Trimarchi J, Punzo C, Cepko CL, Ohno-Machado L, Hovig E, Kuo WP. Comparison of Hybridization-based and Sequencing-based Gene Expression Technologies on Biological Replicates. BMC Genomics. 2007;8:153. (full text) (pdf)
Galante PAF, Trimarchi J, Cepko C, de Souza SJ, Ohno-Machado L, Kuo WP. Automatic Correspondence of Tags and Genes (ACTG): A Tool for the Analysis of SAGE, MPSS, and SBS Data. Bioinformatics. 2007;(Feb 3). (full text) (pdf)
Ohno-Machado L, Resnic FS, Matheny ME. Prognosis in Critical Care. Annual Review of Biomedical Engineering. 2006;8:567-599.
Kuo WP, Liu F, Trimarchi J, et al. A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies. Nat Biotechnol. 2006;24(7):832-840.
Talos IF, Zou KH, Ohno-Machado L, Bhagwat JG, Kikinis R, Black PM, Jolesz FA. Supratentorial low-grade glioma resectability: statistical predictive analysis based on anatomic MR features and tumor characteristics. Radiology. 2006;239(2):506-13. (full text) (pdf)
Matheny ME, Ohno-Machado L, Resnic FS. Monitoring device safety in interventional cardiology. J Am Med Inform Assoc. 2006;13(2):180-7. (full text) (pdf)
Weber G, Ohno-Machado L, Shieber S. Representation in stochastic search for phylogenetic tree reconstruction. J Biomed Inform. 2006;39(1):43-50.
Vinterbo SA, Dreiseitl S, Ohno-Machado L. Approximation properties of haplotype tagging. BMC Bioinformatics. 2006;7 :8. (full text) (pdf)
Lasko TA, Bhagwat JG, Zou KH, Ohno-Machado L. The use of receiver operating characteristic curves in biomedical informatics. J Biomed Inform. 2005;38(5):404-15.
Zou KH, Resnic FS, Talos IF, Goldberg-Zimring D, Bhagwat JG, Haker SJ, Kikinis R, Jolesz FA, Ohno-Machado L. A global goodness-of-fit test for receiver operating characteristic curve analysis via the bootstrap method. J Biomed Inform. 2005;38(5):395-403.
Matheny ME, Ohno-Machado L, Resnic FS. Discrimination and calibration of mortality risk prediction models in interventional cardiology. J Biomed Inform. 2005;38(5):367-75.
Vinterbo SA, Kim EY, Ohno-Machado L. Small, fuzzy and interpretable gene expression based classifiers. Bioinformatics. 2005;21(9):1964-70.
Carrino JA, Ohno-Machado L. Development of radiology prediction models using feature analysis. Acad Radiol. 2005;12(4):415-21.
Other publications available in PubMed. |