Pedro Alexandre Favoretto Galante, Ph.D.
Visiting Post-Doc
Education
2004-2007
Ph.D., Biochemistry. University of Sāo Paulo [1]. Brazil.
Thesis: Use of computational methods to study the transcription and gene regulation in Homo sapiens and Mus musculus
[PDF]
Advisors: Dr. Bettina Malnic and Dr. Sandro José de Souza
1999-2003
B.A. Ciência Moleculares [2]. University of Sāo Paulo [1]. Brazil.
Contact
- Location: 900 Commonwealth Avenue. Boston, MA 02215. 3rd floor, office C1333.
- Phone : 1-617-732-7679
- E-mail : pgalante@ludwig.org.br
Publications
(* These authors contributed equally to these works)
2008
da Cunha JP*, Galante PA*, de Souza SJ.
Different Evolutionary Strategies for the Origin of Caspase-1 Inhibitors.
J Mol Evol. 2008 May 14. [PubMed]
Madeira L*, Galante PA*, Budu A, Azevedo MF, Malnic B, Garcia CR.
Genome-wide detection of serpentine receptor-like proteins in malaria parasites.
PLoS ONE. 2008; 3(3): e1889. [PubMed]
Leoni SG, Galante PA, Ricarte-Filho JC, Kimura ET.
Differential gene expression analysis of iodide-treated rat thyroid follicular cell line PCCl3.
Genomics. 2008; 91(4): 356-66. [PubMed]
2007
Ferreira EN, Galante PA, Carraro DM, de Souza SJ.
Alternative splicing: a bioinformatics perspective.
Mol Biosyst. 2007; 3(7): 473-7. [PubMed]
Galante PA, Vidal DO, de Souza JE, Camargo AA, de Souza SJ.
Sense-antisense pairs in mammals: functional and evolutionary Considerations.
Genome Biol. 2007; 8(3): R40. [PubMed]
Galante PA, Trimarchi J, Cepko CL, de Souza SJ, Ohno-Machado L, Kuo WP.
Automatic correspondence of tags and genes (ACTG): a tool for the analysis of SAGE, MPSS and SBS data.
Bioinformatics. 2007; 23(7): 903-5. [PubMed]
2006
Michaloski JS, Galante PA, Malnic B.
Identification of potential regulatory motifs in odorant receptor genes by analysis of promoter sequences.
Genome Res. 2006; 16(9): 1091-8.[PubMed]
2005
de Souza SJ, Galante PA, Soares R.
Using ORESTES ESTs to mine gene cancer expression data.
Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics. 2005; John Wiley & Sons, Ltd. [PDF]
2004
Parmigiani RB, Magalhães GS, Galante PA, Manzini CV, Camargo AA, Malnic B.
A novel human G protein-coupled receptor is over-expressed in prostate cancer.
Genet Mol Res. 2004; 3(4): 521-31. [PubMed]
Kirschbaum-Slager N, Lopes GM, Galante PA, Riggins GJ, de Souza SJ.
Splicing factors are differentially expressed in tumors.
Genet Mol Res. 2004; 3(4): 512-20. [PubMed]
Silva AP, De Souza JE, Galante PA, Riggins GJ, De Souza SJ, Camargo AA.
The impact of SNPs on the interpretation of SAGE and MPSS experimental data.
Nucleic Acids Res. 2004; 32(20): 6104-10. [PubMed]
Galante PA, Sakabe NJ, Kirschbaum-Slager N, de Souza SJ.
Detection and evaluation of intron retention events in the human transcriptome.
RNA. 2004; 10(5): 757-65. [PubMed]
2003
Sakabe NJ, de Souza JE, Galante PA, de Oliveira PS, Passetti F, Brentani H, Osório EC, Zaiats AC, Leerkes MR, Kitajima JP, Brentani RR, Strausberg RL, Simpson AJ, de Souza SJ.
ORESTES are enriched in rare exon usage variants affecting the encoded proteins.
C R Biol. 2003; 326(10-11): 979-85. [PubMed]
Brentani H, Caballero OL, Camargo AA, da Silva AM, da Silva WA Jr, Dias Neto E, Grivet M, Gruber A, Guimaraes PE, Hide W, Iseli C, Jongeneel CV, Kelso J, Nagai MA, Ojopi EP, Osorio EC, Reis EM, Riggins GJ, Simpson AJ, de Souza S, Stevenson BJ, Strausberg RL, Tajara EH, Verjovski-Almeida S, Acencio ML, Bengtson MH, Bettoni F, Bodmer WF, Briones MR, Camargo LP, Cavenee W, Cerutti JM, Coelho Andrade LE, Costa dos Santos PC, Ramos Costa MC, da Silva IT, Estécio MR, As Ferreira K, Furnari FB, Faria M Jr, Galante PA, et al.
The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags.
Proc Natl Acad Sci U S A. 2003; 100(23): 13418-23. [PubMed]
